#!/usr/bin/python

# Deposition for the SECOND sample

from process import *
import odict
import time

tcsdir = "../../research/TCS/"
imagedir = "au_deposition2/"

smooth = [4,5]

os.system("mkdir -p " + imagedir.strip("/"))

toplot = odict.odict([
	("Si (initial)" , [tcsdir+"2012-09-27/Si/095131.dat", 1]),
	("Si (refocused)", [tcsdir+"2012-09-27/Si (focused)/140416.dat", 5]), # For some reason I altered the focus of the gun, not a good idea
	("Au (30min 4.0A e-8mbar)", [tcsdir+"2012-09-27/Au on Si/151444.dat", 5]),
	#("Au +5min", tcsdir+"2012-09-27/151951.dat"),
	#("Au +1hour", tcsdir+"2012-09-27/161548.dat"),
	#("Au +2hour", tcsdir+"2012-09-27/171618.dat"),
	("Au +8hour", [tcsdir+"2012-09-27/Au on Si/235714.dat", 5]),
	("Au (avg over +8hour to +32hour)", [tcsdir+"2012-09-28/average.dat", 1]),
	("Au (avg over +32hour to +56hour)", [tcsdir+"2012-09-29/average.dat", 1]),
	("Au (avg over +56hour to +80hour)", [tcsdir+"2012-09-30/average.dat", 1]),
	("Au (avg over +80hour to +104hour)", [tcsdir+"2012-10-01/average.dat", 1])
])

# I(E) (normalised) data
gnuplot.reset()

for f in toplot.items():
	d = ShowData(f[1][0], title=f[0], plot=gnuplot.replot, calibrate=True, normalise=True)

gnuplot("set term postscript colour")
gnuplot("set output \""+imagedir+"normalised_data.eps\"")
gnuplot("set title \"Deposition of Au on Si I(E) curves\"")
gnuplot("set key top left")
gnuplot.replot()

time.sleep(1)

# TCS (normalised) data
gnuplot.reset()
gnuplot("set term wxt")
gnuplot("set term postscript colour")
gnuplot("set output \""+imagedir+"tcs_normalised.eps\"")
gnuplot("set title \"Deposition of Au on Si S(E) curves\"")
gnuplot("set key top right")

for f in toplot.items():
	d = ShowTCS(f[1][0], title=f[0], plot=gnuplot.plot, calibrate=True, normalise=True, with_="lp", step=1, smooth=smooth)
time.sleep(1)

#os.system("cd "+imagedir+"; for i in *.eps; do epstopdf --autorotate=All $i; done; rm *.eps")